FFCP PHASE1:Hg19::chr4:41361616..41361632,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p8@LIMCH1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_LIMCH1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000513024_5end |
| EntrezGene: | LIMCH1 |
| HGNC: | 29191 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@LIMCH1 |
|---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| larynx | 4.61e-42 | 9 |
| respiratory primordium | 1.20e-36 | 38 |
| endoderm of foregut | 1.20e-36 | 38 |
| respiratory tract | 1.55e-24 | 54 |
| foregut | 6.79e-24 | 87 |
| respiratory system | 9.65e-24 | 74 |
| subdivision of digestive tract | 2.54e-19 | 118 |
| segment of respiratory tract | 2.79e-19 | 47 |
| upper respiratory tract | 4.41e-19 | 19 |
| digestive system | 4.14e-16 | 145 |
Showing 1 to 10 of 36 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 2.95e-18 | 106 |
| cell type cancer | 7.51e-15 | 143 |
| cancer | 1.86e-08 | 235 |
| disease of cellular proliferation | 3.68e-08 | 239 |
| lung cancer | 1.45e-07 | 15 |
| respiratory system cancer | 4.48e-07 | 16 |
Showing 1 to 6 of 6 entries
